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r-cran-qtl GNU R package for genetic marker linkage analysis
Installed size 3288
Maintainer Dirk Eddelbuettel <edd@debian.org>
Architecture i386
Version 1.05-2-1
Depends atlas3-base | refblas3 | libblas.so.3, libc6 (>= 2.3.6-6), libgcc1 (>= 1
Suggests r-cran-mcmcpack
File name pool/main/q/qtl/r-cran-qtl_1.05-2-1_i386.deb
Description R/qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental crosses. It is implemented as an add-on-package for the freely available and widely used statistical language/software R (see http://www.r-project.org). The user will benefit from the seamless integration of the QTL mapping software into a general statistical analysis program. . The current version of R/qtl includes facilities for estimating genetic maps, identifying genotyping errors, and performing single-QTL genome scans and two-QTL, two-dimensional genome scans, by interval mapping (with EM algorithm), Haley-Knott regression, and multiple imputation. All of this may be done in the presence of covariates (such as sex, age or treatment). The fit of higher-order QTL models, with sophisticated techniques for model comparisons and model search, will be incorporated soon. . URL: http://www.biostat.jhsph.edu/~kbroman/qtl/index.html

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